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Found 272 results for log2(Irr72h/Irr24h) <= -1 and fdr <= 0.05. Showing entries 1-20.

Graph Cluster Transcripts Mean logCPM Classification Smed/Human type Human gene Annotation
1. MligTC39-572.31120 Mlig065508.g1, Mlig073505.g1, Mlig999030.g1, Mlig066048.g1 9.88

Mlig065508.g1 {REF} {Length: 318}

Mlig073505.g1 {REF} {Length: 1749} {NoTransDecoderORF} {RNA1509_40743}

Mlig066048.g1 {REF} {Length: 274} {NoTransDecoderORF} {RNA1509_44427}
2. MligTC39-572.18593 Mlig081693.g1, Mlig011948.g11 6.49

Mlig081693.g1 {REF} {Length: 902} {RNA1509_22192, RNA1509_24, RNA1509_2520, RNA1509_267, RNA1509_57785}

Mlig011948.g11 {REF} {Length: 357} {RNA1509_267}
3. MligTC39-21738.0 Mlig002011.g6 5.84 Mlig002011.g6 {REF} {Length: 2722} {TRANSSPLICED} {RNA1509_1096, RNA1509_1313, RNA1509_370}
4. MligTC39-572.14392 Mlig039227.g3 5.62 Mlig039227.g3 {REF} {Length: 710} {NoTransDecoderORF} {RNA1509_25000}
5. MligTC39-572.18598 Mlig011948.g17, Mlig011948.g16, Mlig011948.g15, Mlig015871.g3, Mlig011948.g13 5.42

Mlig011948.g17 {REF} {Length: 1221} {RNA1509_267}

Mlig011948.g16 {REF} {Length: 1814} {Ipul: Ipul017707.g1, Ipul017707.g1, [Score=51.6, Expect=5e-09]} {RNA1509_267}

Mlig011948.g15 {REF} {Length: 813} {RNA1509_267}

Mlig015871.g3 {REF} {Length: 814} {RNA1509_267}

Mlig011948.g13 {REF} {Length: 558} {RNA1509_267}
6. MligTC39-572.3349 Mlig003009.g1, Mlig011580.g1 5.42

Mlig003009.g1 {REF} {Length: 1191} {RNA1509_1537, RNA1509_31884}

Mlig011580.g1 {REF} {Length: 835} {RNA1509_57043}
7. MligTC39-572.3084 Mlig051533.g3, Mlig032648.g4, Mlig001698.g3 5.3

Mlig051533.g3 {REF} {Length: 1361} {RNA1509_24510}

Mlig032648.g4 {REF} {Length: 1532} {RNA1509_1537}

Mlig001698.g3 {REF} {Length: 709} {RNA1509_18533}
8. MligTC39-572.5043 Mlig034252.g3 5.22

 Irradiation 

 Int S/G2/M 

 Germline 

X1 TUBB8 Mlig034252.g3 {REF} {Length: 1771} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.25, score=124.8]; Tubulin C-terminal domain [PF03953.17, score=58.8]} {Human: ENSG00000261456, TUBB8, tubulin beta 8 class VIII, [Score=277, Expect=6e-89]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [Score=264, Expect=8e-84]; ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [Score=264, Expect=8e-84]} {Mouse: ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [Score=264, Expect=6e-84]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [Score=264, Expect=5e-84]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [Score=260, Expect=2e-82]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [Score=260, Expect=2e-82]; ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [Score=260, Expect=2e-82]; ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [Score=259, Expect=4e-82]; ENSMUSG00000016255, Tubb1, tubulin, beta 1 class VI, [Score=253, Expect=1e-79]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [Score=252, Expect=2e-79]} {Dmel: FBgn0284243, betaTub56D, beta-Tubulin at 56D, [Score=266, Expect=1e-84]} {Celegans: WBGene00003171, mec-7, Tubulin beta-1 chain, [Score=267, Expect=3e-85]} {Smed: dd_Smed_v6_83_0_3, dd_Smed_v6_83_0_3, [Score=264, Expect=2e-84]} {Ipul: Ipul007094.g1, Ipul007094.g1, [Score=265, Expect=2e-84]} {RNA1509_1691, RNA1509_641, RNA1509_7978} {SMEDTYPE: X1 [raj_facs_types]}
9. MligTC39-572.9442 Mlig020601.g1 5.02 Mlig020601.g1 {REF} {Length: 2061} {RNA1509_20173, RNA1509_27873, RNA1509_47341, RNA1509_49105, RNA1509_59663}
10. MligTC39-572.9440 Mlig013221.g2 4.91 Mlig013221.g2 {REF} {Length: 4931} {RNA1509_21210, RNA1509_25057, RNA1509_37447, RNA1509_40812}
11. MligTC39-572.10552 Mlig015295.g5, Mlig015295.g10 4.89

 Irradiation 

 Int S/G2/M 

 Germline 

Xins CNFN

Mlig015295.g5 {REF} {Length: 837} {Pfam: PLAC8 family [PF04749.17, score=74.4]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=46.6, Expect=5e-07]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=45.8, Expect=7e-07]} {Smed: dd_Smed_v6_1291_0_1, dd_Smed_v6_1291_0_1, [Score=97.1, Expect=2e-27]} {Ipul: Ipul027314.g1, Ipul027314.g1, [RH, Score=98.2, Expect=1e-27]} {RNA1509_31898} {SMEDTYPE: Xins [raj_facs_types]}

Mlig015295.g10 {REF} {Length: 837} {Pfam: PLAC8 family [PF04749.17, score=74.4]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=46.6, Expect=5e-07]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=45.8, Expect=7e-07]} {Smed: dd_Smed_v6_1291_0_1, dd_Smed_v6_1291_0_1, [Score=97.1, Expect=2e-27]} {Ipul: Ipul027314.g1, Ipul027314.g1, [RH, Score=98.2, Expect=1e-27]} {RNA1509_2410, RNA1509_31898, RNA1509_36623} {SMEDTYPE: Xins [raj_facs_types]}
12. MligTC39-572.14706 Mlig014782.g1 4.81 Mlig014782.g1 {REF} {Length: 806} {RNA1509_12074, RNA1509_14987, RNA1509_32930, RNA1509_59945, RNA1509_9557, RNA1509_9864}
13. MligTC39-572.5483 Mlig008200.g2, Mlig074047.g1 4.68 CHML; CHM

Mlig008200.g2 {REF} {Length: 2455} {Pfam: GDP dissociation inhibitor [PF00996.18, score=45.9]} {Human: ENSG00000188419, CHM, CHM, Rab escort protein 1, [RH, Score=54.3, Expect=7e-09]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [Score=58.2, Expect=7e-09]; ENSMUSG00000078185, Chml, choroideremia-like, [Score=58.2, Expect=8e-09]} {Dmel: FBgn0026378, Rep, Rab escort protein, [Score=105, Expect=8e-25]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [Score=80.5, Expect=9e-17]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [Score=82.4, Expect=4e-17]} {Ipul: Ipul006166.g28, Ipul006166.g28, [RH, Score=49.3, Expect=6e-07]} {RNA1509_4462}

Mlig074047.g1 {REF} {Length: 3031} {Pfam: GDP dissociation inhibitor [PF00996.18, score=83.9]} {Human: ENSG00000203668, CHML, CHM like, Rab escort protein 2, [RH, Score=56.6, Expect=1e-09]} {Mouse: ENSMUSG00000025531, Chm, choroidermia (RAB escort protein 1), [Score=57.8, Expect=2e-08]; ENSMUSG00000078185, Chml, choroideremia-like, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0026378, Rep, Rab escort protein, [RH, Score=179, Expect=2e-49]} {Celegans: WBGene00022051, rep-1, Rab Escort Protein homolog, [RH, Score=129, Expect=5e-32]} {Smed: dd_Smed_v6_4518_0_1, dd_Smed_v6_4518_0_1, [Score=141, Expect=1e-35]} {Ipul: Ipul005149.g3, Ipul005149.g3, [RH, Score=74.7, Expect=1e-14]} {RNA1509_3036, RNA1509_4462}
14. MligTC39-22977.1 Mlig007744.g2, Mlig007744.g3 4.49 X1 FAU

Mlig007744.g2 {REF} {Length: 980} {Pfam: Ribosomal protein S30 [PF04758.14, score=43.6]} {Human: ENSG00000149806, FAU, FAU, ubiquitin like and ribosomal protein S30 fusion, [Score=44.3, Expect=5e-06]} {Mouse: ENSMUSG00000038274, Fau, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), [Score=43.5, Expect=1e-05]} {Dmel: FBgn0038834, RpS30, Ribosomal protein S30, [Score=45.1, Expect=2e-06]} {Smed: dd_Smed_v6_126_0_1, dd_Smed_v6_126_0_1, [Score=48.9, Expect=9e-08]} {Ipul: Ipul019646.g4, Ipul019646.g4, [Score=55.5, Expect=3e-10]} {RNA1509_10703} {SMEDTYPE: X1 [raj_facs_types]}

Mlig007744.g3 {REF} {Length: 980} {Pfam: Ribosomal protein S30 [PF04758.14, score=43.9]} {Human: ENSG00000149806, FAU, FAU, ubiquitin like and ribosomal protein S30 fusion, [Score=44.3, Expect=5e-06]} {Mouse: ENSMUSG00000038274, Fau, Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), [Score=43.5, Expect=1e-05]} {Dmel: FBgn0038834, RpS30, Ribosomal protein S30, [Score=45.4, Expect=2e-06]} {Smed: dd_Smed_v6_126_0_1, dd_Smed_v6_126_0_1, [Score=48.5, Expect=1e-07]} {Ipul: Ipul019646.g4, Ipul019646.g4, [Score=55.5, Expect=2e-10]} {RNA1509_10703} {SMEDTYPE: X1 [raj_facs_types]}
15. MligTC39-21043.0 Mlig010363.g4 4.41 Mlig010363.g4 {REF} {Length: 386} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_5493, RNA1509_9918}
16. MligTC39-572.27837 Mlig028300.g1 4.36 Mlig028300.g1 {REF} {Length: 476} {NoTransDecoderORF} {RNA1509_12805, RNA1509_56171}
17. MligTC39-572.24377 Mlig019556.g7, Mlig006516.g1, Mlig009467.g1 4.24 PSMC5

Mlig019556.g7 {REF} {Length: 373} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54961}

Mlig006516.g1 {REF} {Length: 4451} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.29, score=139.1]; AAA+ lid domain [PF17862.1, score=48.4]; AAA domain (dynein-related subfamily) [PF07728.14, score=28.9]; AAA ATPase domain [PF13191.6, score=28.2]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.12, score=22.6]; AAA domain [PF13401.6, score=20.9]; AAA domain (Cdc48 subfamily) [PF07724.14, score=18.6]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [Score=409, Expect=2e-140]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [Score=408, Expect=3e-140]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [Score=408, Expect=2e-140]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [Score=390, Expect=2e-133]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [Score=400, Expect=4e-137]} {Ipul: Ipul015736.g2, Ipul015736.g2, [Score=398, Expect=2e-136]} {RNA1509_1195}

Mlig009467.g1 {REF} {Length: 1937} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.29, score=138.9]; AAA domain (dynein-related subfamily) [PF07728.14, score=28.8]; AAA ATPase domain [PF13191.6, score=27.8]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.12, score=22.2]; AAA domain [PF13401.6, score=20.9]; AAA domain (Cdc48 subfamily) [PF07724.14, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [Score=339, Expect=3e-113]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [Score=339, Expect=3e-113]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [Score=338, Expect=4e-113]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [Score=327, Expect=2e-108]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [Score=331, Expect=4e-110]} {Ipul: Ipul015736.g2, Ipul015736.g2, [Score=332, Expect=2e-110]} {RNA1509_1195}
18. MligTC39-572.15417 Mlig008619.g2, Mlig008619.g3, Mlig014789.g5, Mlig076906.g1 4.23

 Irradiation 

 Int S/G2/M 

 Germline 

X2; Xins; Sexual_biased PPP1CA; PPP1CC

Mlig008619.g2 {REF} {Length: 1534} {Pfam: Calcineurin-like phosphoesterase [PF00149.28, score=84.7]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=177, Expect=3e-51]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=176, Expect=1e-50]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=174, Expect=2e-50]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=177, Expect=2e-51]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=177, Expect=2e-51]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=175, Expect=1e-50]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=174, Expect=1e-50]} {Dmel: FBgn0000711, flw, flapwing, [Score=172, Expect=1e-49]} {Celegans: WBGene00001747, gsp-1, Serine/threonine-protein phosphatase PP1-alpha, [Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_751_0_1, dd_Smed_v6_751_0_1, [Score=174, Expect=1e-50]} {Ipul: Ipul033326.g5, Ipul033326.g5, [Score=174, Expect=2e-50]} {RNA1509_1221}

Mlig008619.g3 {REF} {Length: 1706} {Pfam: Calcineurin-like phosphoesterase [PF00149.28, score=85.4]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=174, Expect=1e-50]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=174, Expect=6e-51]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=173, Expect=3e-50]} {Mouse: ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=174, Expect=9e-51]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=174, Expect=4e-51]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=174, Expect=4e-51]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=173, Expect=2e-50]} {Dmel: FBgn0261399, Pp1-Y1, Protein phosphatase 1, Y-linked 1, [Score=171, Expect=7e-50]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=174, Expect=4e-51]} {Smed: dd_Smed_v6_751_0_1, dd_Smed_v6_751_0_1, [Score=172, Expect=9e-51]} {Ipul: Ipul033326.g5, Ipul033326.g5, [Score=172, Expect=3e-50]} {RNA1509_1221}

Mlig014789.g5 {REF} {Length: 1865} {Pfam: Calcineurin-like phosphoesterase [PF00149.28, score=85.4]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=174, Expect=1e-50]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=174, Expect=6e-51]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=173, Expect=3e-50]} {Mouse: ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=174, Expect=9e-51]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=174, Expect=4e-51]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=174, Expect=4e-51]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=173, Expect=2e-50]} {Dmel: FBgn0261399, Pp1-Y1, Protein phosphatase 1, Y-linked 1, [Score=171, Expect=7e-50]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=174, Expect=4e-51]} {Smed: dd_Smed_v6_751_0_1, dd_Smed_v6_751_0_1, [Score=172, Expect=9e-51]} {Ipul: Ipul033326.g5, Ipul033326.g5, [Score=172, Expect=3e-50]} {RNA1509_1221}

Mlig076906.g1 {REF} {Length: 2024} {Pfam: Calcineurin-like phosphoesterase [PF00149.28, score=37.1]} {Human: ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=104, Expect=8e-26]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=103, Expect=1e-25]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=102, Expect=3e-25]} {Mouse: ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=103, Expect=8e-26]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=103, Expect=1e-25]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=102, Expect=4e-25]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=102, Expect=4e-25]} {Dmel: FBgn0003140, PpY-55A, Protein phosphatase Y at 55A, [Score=101, Expect=3e-25]} {Celegans: WBGene00020985, W03D8.2, Serine/threonine-protein phosphatase, [Score=109, Expect=3e-28]} {Smed: dd_Smed_v6_1407_0_1, dd_Smed_v6_1407_0_1, [Score=102, Expect=7e-26]} {Ipul: Ipul033326.g5, Ipul033326.g5, [Score=101, Expect=4e-25]} {RNA1509_1221} {SMEDTYPE: X2; Xins [raj_facs_types]} {SMEDTYPE: Sexual_biased [CUFF.183088.0]}
19. MligTC39-572.5448 Mlig032372.g2 4.19 X1 PSMC4 Mlig032372.g2 {REF} {Length: 1677} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.29, score=135.6]; AAA+ lid domain [PF17862.1, score=35.4]; AAA domain (dynein-related subfamily) [PF07728.14, score=30.4]; AAA ATPase domain [PF13191.6, score=28.1]; AAA domain [PF13401.6, score=20.8]; AAA domain [PF13481.6, score=19.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.12, score=19.5]; AAA domain (Cdc48 subfamily) [PF07724.14, score=18.6]} {Human: ENSG00000013275, PSMC4, proteasome 26S subunit, ATPase 4, [Score=340, Expect=2e-112]; ENSG00000281221, PSMC4, proteasome 26S subunit, ATPase 4, [Score=340, Expect=2e-112]} {Mouse: ENSMUSG00000030603, Psmc4, proteasome (prosome, macropain) 26S subunit, ATPase, 4, [Score=340, Expect=1e-112]} {Dmel: FBgn0028686, Rpt3, Regulatory particle triple-A ATPase 3, [Score=349, Expect=3e-116]} {Celegans: WBGene00004503, rpt-3, Probable 26S protease regulatory subunit 6B, [Score=330, Expect=5e-109]} {Smed: dd_Smed_v6_1279_0_1, dd_Smed_v6_1279_0_1, [Score=331, Expect=2e-109]} {Ipul: Ipul009294.g1, Ipul009294.g1, [Score=336, Expect=2e-111]} {RNA1509_10595, RNA1509_1398} {SMEDTYPE: X1 [raj_facs_types]}
20. MligTC39-572.23403 Mlig029560.g2 4.13

 Irradiation 

 Int S/G2/M 

 Germline 

Mlig029560.g2 {REF} {Length: 2252} {RNA1509_22239, RNA1509_52814, RNA1509_5870, RNA1509_8343, RNA1509_9907}
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